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# -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.5, 0.0333, 0, 0.66, 0, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 1, 0, 0.5333, 0.0333, 0, 0.66, 0.5, 154, 0, 1, 0, 0, 154, 0, 0 ], [ 2, 0, 0.8333, 0.3667, 0, 0.66, ...
[ "import inspect", "import hashlib", "def start_cpp(hash_str = None):\n \"\"\"This method does two things - firstly it adds the correct line numbers to scipy.weave code (Good for debugging) and secondly it can optionaly inserts a hash code of some other code into the code. This latter feature is useful for work...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.2031, 0.0156, 0, 0.66, 0, 509, 0, 1, 0, 0, 509, 0, 0 ], [ 1, 0, 0.2188, 0.0156, 0, 0.66, 0.125, 79, 0, 1, 0, 0, 79, 0, 0 ], [ 1, 0, 0.2344, 0.0156, 0, 0.6...
[ "import sys", "import os.path", "import tempfile", "import shutil", "from distutils.core import setup, Extension", "import distutils.ccompiler", "import distutils.dep_util", "try:\n __default_compiler = distutils.ccompiler.new_compiler()\nexcept:\n __default_compiler = None", " __default_compiler...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0634, 0.0049, 0, 0.66, 0, 291, 0, 1, 0, 0, 291, 0, 0 ], [ 1, 0, 0.0683, 0.0049, 0, 0.66, 0.5, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 3, 0, 0.5439, 0.9171, 0, 0.6...
[ "import pydoc", "import inspect", "class DocGen:\n \"\"\"A helper class that is used to generate documentation for the system. Outputs multiple formats simultaneously, specifically html for local reading with a webbrowser and the markup used by the wiki system on Google code.\"\"\"\n def __init__(self, name, ...
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.3636, 0.0227, 0, 0.66, 0, 182, 0, 1, 0, 0, 182, 0, 0 ], [ 2, 0, 0.5682, 0.25, 0, 0.66, 0.5, 903, 0, 1, 0, 0, 0, 0, 9 ], [ 8, 1, 0.4773, 0.0227, 1, 0.7, ...
[ "from ctypes import *", "def setProcName(name):\n \"\"\"Sets the process name, linux only - useful for those programs where you might want to do a killall, but don't want to slaughter all the other python processes. Note that there are multiple mechanisms, and that the given new name can be shortened by differin...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1456, 0.0097, 0, 0.66, 0, 901, 0, 1, 0, 0, 901, 0, 0 ], [ 1, 0, 0.1553, 0.0097, 0, 0.66, 0.1111, 99, 0, 1, 0, 0, 99, 0, 0 ], [ 1, 0, 0.1748, 0.0097, 0, 0....
[ "import multiprocessing as mp", "import multiprocessing.synchronize # To make sure we have all the functionality.", "import types", "import marshal", "import unittest", "def repeat(x):\n \"\"\"A generator that repeats the input forever - can be used with the mp_map function to give data to a function tha...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1923, 0.0128, 0, 0.66, 0, 972, 0, 1, 0, 0, 972, 0, 0 ], [ 14, 0, 0.6282, 0.7564, 0, 0.66, 1, 799, 4, 0, 0, 0, 0, 0, 1 ] ]
[ "from utils.start_cpp import start_cpp", "numpy_util_code = start_cpp() + \"\"\"\n#ifndef NUMPY_UTIL_CODE\n#define NUMPY_UTIL_CODE\n\nfloat & Float1D(PyArrayObject * arr, int index = 0)\n{\n return *(float*)(arr->data + index*arr->strides[0]);\n}" ]
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.2857, 0.0179, 0, 0.66, 0, 192, 0, 1, 0, 0, 192, 0, 0 ], [ 1, 0, 0.3036, 0.0179, 0, 0.66, 0.0385, 905, 0, 1, 0, 0, 905, 0, 0 ], [ 1, 0, 0.3214, 0.0179, 0, ...
[ "import cvarray", "import mp_map", "import prog_bar", "import numpy_help_cpp", "import python_obj_cpp", "import matrix_cpp", "import gamma_cpp", "import setProcName", "import start_cpp", "import make", "import doc_gen", "doc = doc_gen.DocGen('utils', 'Utilities/Miscellaneous', 'Library of misc...
# Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0818, 0.0063, 0, 0.66, 0, 88, 0, 1, 0, 0, 88, 0, 0 ], [ 1, 0, 0.0881, 0.0063, 0, 0.66, 0.0909, 715, 0, 1, 0, 0, 715, 0, 0 ], [ 1, 0, 0.0943, 0.0063, 0, 0....
[ "import unittest", "import random", "import math", "from scipy.special import gammaln, psi, polygamma", "from scipy import weave", "from utils.start_cpp import start_cpp", "gamma_code = start_cpp() + \"\"\"\n#ifndef GAMMA_CODE\n#define GAMMA_CODE\n\n#include <cmath>\n\n// Returns the natural logarithm o...
# -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.5, 0.0333, 0, 0.66, 0, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 1, 0, 0.5333, 0.0333, 0, 0.66, 0.5, 154, 0, 1, 0, 0, 154, 0, 0 ], [ 2, 0, 0.8333, 0.3667, 0, 0.66, ...
[ "import inspect", "import hashlib", "def start_cpp(hash_str = None):\n \"\"\"This method does two things - firstly it adds the correct line numbers to scipy.weave code (Good for debugging) and secondly it can optionaly inserts a hash code of some other code into the code. This latter feature is useful for work...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.2031, 0.0156, 0, 0.66, 0, 509, 0, 1, 0, 0, 509, 0, 0 ], [ 1, 0, 0.2188, 0.0156, 0, 0.66, 0.125, 79, 0, 1, 0, 0, 79, 0, 0 ], [ 1, 0, 0.2344, 0.0156, 0, 0.6...
[ "import sys", "import os.path", "import tempfile", "import shutil", "from distutils.core import setup, Extension", "import distutils.ccompiler", "import distutils.dep_util", "try:\n __default_compiler = distutils.ccompiler.new_compiler()\nexcept:\n __default_compiler = None", " __default_compiler...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0634, 0.0049, 0, 0.66, 0, 291, 0, 1, 0, 0, 291, 0, 0 ], [ 1, 0, 0.0683, 0.0049, 0, 0.66, 0.5, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 3, 0, 0.5439, 0.9171, 0, 0.6...
[ "import pydoc", "import inspect", "class DocGen:\n \"\"\"A helper class that is used to generate documentation for the system. Outputs multiple formats simultaneously, specifically html for local reading with a webbrowser and the markup used by the wiki system on Google code.\"\"\"\n def __init__(self, name, ...
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.3636, 0.0227, 0, 0.66, 0, 182, 0, 1, 0, 0, 182, 0, 0 ], [ 2, 0, 0.5682, 0.25, 0, 0.66, 0.5, 903, 0, 1, 0, 0, 0, 0, 9 ], [ 8, 1, 0.4773, 0.0227, 1, 0.67, ...
[ "from ctypes import *", "def setProcName(name):\n \"\"\"Sets the process name, linux only - useful for those programs where you might want to do a killall, but don't want to slaughter all the other python processes. Note that there are multiple mechanisms, and that the given new name can be shortened by differin...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1456, 0.0097, 0, 0.66, 0, 901, 0, 1, 0, 0, 901, 0, 0 ], [ 1, 0, 0.1553, 0.0097, 0, 0.66, 0.1111, 99, 0, 1, 0, 0, 99, 0, 0 ], [ 1, 0, 0.1748, 0.0097, 0, 0....
[ "import multiprocessing as mp", "import multiprocessing.synchronize # To make sure we have all the functionality.", "import types", "import marshal", "import unittest", "def repeat(x):\n \"\"\"A generator that repeats the input forever - can be used with the mp_map function to give data to a function tha...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1923, 0.0128, 0, 0.66, 0, 972, 0, 1, 0, 0, 972, 0, 0 ], [ 14, 0, 0.6282, 0.7564, 0, 0.66, 1, 799, 4, 0, 0, 0, 0, 0, 1 ] ]
[ "from utils.start_cpp import start_cpp", "numpy_util_code = start_cpp() + \"\"\"\n#ifndef NUMPY_UTIL_CODE\n#define NUMPY_UTIL_CODE\n\nfloat & Float1D(PyArrayObject * arr, int index = 0)\n{\n return *(float*)(arr->data + index*arr->strides[0]);\n}" ]
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.2857, 0.0179, 0, 0.66, 0, 192, 0, 1, 0, 0, 192, 0, 0 ], [ 1, 0, 0.3036, 0.0179, 0, 0.66, 0.0385, 905, 0, 1, 0, 0, 905, 0, 0 ], [ 1, 0, 0.3214, 0.0179, 0, ...
[ "import cvarray", "import mp_map", "import prog_bar", "import numpy_help_cpp", "import python_obj_cpp", "import matrix_cpp", "import gamma_cpp", "import setProcName", "import start_cpp", "import make", "import doc_gen", "doc = doc_gen.DocGen('utils', 'Utilities/Miscellaneous', 'Library of misc...
# Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0818, 0.0063, 0, 0.66, 0, 88, 0, 1, 0, 0, 88, 0, 0 ], [ 1, 0, 0.0881, 0.0063, 0, 0.66, 0.0909, 715, 0, 1, 0, 0, 715, 0, 0 ], [ 1, 0, 0.0943, 0.0063, 0, 0....
[ "import unittest", "import random", "import math", "from scipy.special import gammaln, psi, polygamma", "from scipy import weave", "from utils.start_cpp import start_cpp", "gamma_code = start_cpp() + \"\"\"\n#ifndef GAMMA_CODE\n#define GAMMA_CODE\n\n#include <cmath>\n\n// Returns the natural logarithm o...
# -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.5, 0.0333, 0, 0.66, 0, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 1, 0, 0.5333, 0.0333, 0, 0.66, 0.5, 154, 0, 1, 0, 0, 154, 0, 0 ], [ 2, 0, 0.8333, 0.3667, 0, 0.66, ...
[ "import inspect", "import hashlib", "def start_cpp(hash_str = None):\n \"\"\"This method does two things - firstly it adds the correct line numbers to scipy.weave code (Good for debugging) and secondly it can optionaly inserts a hash code of some other code into the code. This latter feature is useful for work...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.2031, 0.0156, 0, 0.66, 0, 509, 0, 1, 0, 0, 509, 0, 0 ], [ 1, 0, 0.2188, 0.0156, 0, 0.66, 0.125, 79, 0, 1, 0, 0, 79, 0, 0 ], [ 1, 0, 0.2344, 0.0156, 0, 0.6...
[ "import sys", "import os.path", "import tempfile", "import shutil", "from distutils.core import setup, Extension", "import distutils.ccompiler", "import distutils.dep_util", "try:\n __default_compiler = distutils.ccompiler.new_compiler()\nexcept:\n __default_compiler = None", " __default_compiler...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0634, 0.0049, 0, 0.66, 0, 291, 0, 1, 0, 0, 291, 0, 0 ], [ 1, 0, 0.0683, 0.0049, 0, 0.66, 0.5, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 3, 0, 0.5439, 0.9171, 0, 0.6...
[ "import pydoc", "import inspect", "class DocGen:\n \"\"\"A helper class that is used to generate documentation for the system. Outputs multiple formats simultaneously, specifically html for local reading with a webbrowser and the markup used by the wiki system on Google code.\"\"\"\n def __init__(self, name, ...
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.3636, 0.0227, 0, 0.66, 0, 182, 0, 1, 0, 0, 182, 0, 0 ], [ 2, 0, 0.5682, 0.25, 0, 0.66, 0.5, 903, 0, 1, 0, 0, 0, 0, 9 ], [ 8, 1, 0.4773, 0.0227, 1, 0.2, ...
[ "from ctypes import *", "def setProcName(name):\n \"\"\"Sets the process name, linux only - useful for those programs where you might want to do a killall, but don't want to slaughter all the other python processes. Note that there are multiple mechanisms, and that the given new name can be shortened by differin...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1456, 0.0097, 0, 0.66, 0, 901, 0, 1, 0, 0, 901, 0, 0 ], [ 1, 0, 0.1553, 0.0097, 0, 0.66, 0.1111, 99, 0, 1, 0, 0, 99, 0, 0 ], [ 1, 0, 0.1748, 0.0097, 0, 0....
[ "import multiprocessing as mp", "import multiprocessing.synchronize # To make sure we have all the functionality.", "import types", "import marshal", "import unittest", "def repeat(x):\n \"\"\"A generator that repeats the input forever - can be used with the mp_map function to give data to a function tha...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1923, 0.0128, 0, 0.66, 0, 972, 0, 1, 0, 0, 972, 0, 0 ], [ 14, 0, 0.6282, 0.7564, 0, 0.66, 1, 799, 4, 0, 0, 0, 0, 0, 1 ] ]
[ "from utils.start_cpp import start_cpp", "numpy_util_code = start_cpp() + \"\"\"\n#ifndef NUMPY_UTIL_CODE\n#define NUMPY_UTIL_CODE\n\nfloat & Float1D(PyArrayObject * arr, int index = 0)\n{\n return *(float*)(arr->data + index*arr->strides[0]);\n}" ]
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.2857, 0.0179, 0, 0.66, 0, 192, 0, 1, 0, 0, 192, 0, 0 ], [ 1, 0, 0.3036, 0.0179, 0, 0.66, 0.0385, 905, 0, 1, 0, 0, 905, 0, 0 ], [ 1, 0, 0.3214, 0.0179, 0, ...
[ "import cvarray", "import mp_map", "import prog_bar", "import numpy_help_cpp", "import python_obj_cpp", "import matrix_cpp", "import gamma_cpp", "import setProcName", "import start_cpp", "import make", "import doc_gen", "doc = doc_gen.DocGen('utils', 'Utilities/Miscellaneous', 'Library of misc...
# Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0818, 0.0063, 0, 0.66, 0, 88, 0, 1, 0, 0, 88, 0, 0 ], [ 1, 0, 0.0881, 0.0063, 0, 0.66, 0.0909, 715, 0, 1, 0, 0, 715, 0, 0 ], [ 1, 0, 0.0943, 0.0063, 0, 0....
[ "import unittest", "import random", "import math", "from scipy.special import gammaln, psi, polygamma", "from scipy import weave", "from utils.start_cpp import start_cpp", "gamma_code = start_cpp() + \"\"\"\n#ifndef GAMMA_CODE\n#define GAMMA_CODE\n\n#include <cmath>\n\n// Returns the natural logarithm o...
# -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.5, 0.0333, 0, 0.66, 0, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 1, 0, 0.5333, 0.0333, 0, 0.66, 0.5, 154, 0, 1, 0, 0, 154, 0, 0 ], [ 2, 0, 0.8333, 0.3667, 0, 0.66, ...
[ "import inspect", "import hashlib", "def start_cpp(hash_str = None):\n \"\"\"This method does two things - firstly it adds the correct line numbers to scipy.weave code (Good for debugging) and secondly it can optionaly inserts a hash code of some other code into the code. This latter feature is useful for work...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.2031, 0.0156, 0, 0.66, 0, 509, 0, 1, 0, 0, 509, 0, 0 ], [ 1, 0, 0.2188, 0.0156, 0, 0.66, 0.125, 79, 0, 1, 0, 0, 79, 0, 0 ], [ 1, 0, 0.2344, 0.0156, 0, 0.6...
[ "import sys", "import os.path", "import tempfile", "import shutil", "from distutils.core import setup, Extension", "import distutils.ccompiler", "import distutils.dep_util", "try:\n __default_compiler = distutils.ccompiler.new_compiler()\nexcept:\n __default_compiler = None", " __default_compiler...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0634, 0.0049, 0, 0.66, 0, 291, 0, 1, 0, 0, 291, 0, 0 ], [ 1, 0, 0.0683, 0.0049, 0, 0.66, 0.5, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 3, 0, 0.5439, 0.9171, 0, 0.6...
[ "import pydoc", "import inspect", "class DocGen:\n \"\"\"A helper class that is used to generate documentation for the system. Outputs multiple formats simultaneously, specifically html for local reading with a webbrowser and the markup used by the wiki system on Google code.\"\"\"\n def __init__(self, name, ...
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.3636, 0.0227, 0, 0.66, 0, 182, 0, 1, 0, 0, 182, 0, 0 ], [ 2, 0, 0.5682, 0.25, 0, 0.66, 0.5, 903, 0, 1, 0, 0, 0, 0, 9 ], [ 8, 1, 0.4773, 0.0227, 1, 0.64, ...
[ "from ctypes import *", "def setProcName(name):\n \"\"\"Sets the process name, linux only - useful for those programs where you might want to do a killall, but don't want to slaughter all the other python processes. Note that there are multiple mechanisms, and that the given new name can be shortened by differin...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1456, 0.0097, 0, 0.66, 0, 901, 0, 1, 0, 0, 901, 0, 0 ], [ 1, 0, 0.1553, 0.0097, 0, 0.66, 0.1111, 99, 0, 1, 0, 0, 99, 0, 0 ], [ 1, 0, 0.1748, 0.0097, 0, 0....
[ "import multiprocessing as mp", "import multiprocessing.synchronize # To make sure we have all the functionality.", "import types", "import marshal", "import unittest", "def repeat(x):\n \"\"\"A generator that repeats the input forever - can be used with the mp_map function to give data to a function tha...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1923, 0.0128, 0, 0.66, 0, 972, 0, 1, 0, 0, 972, 0, 0 ], [ 14, 0, 0.6282, 0.7564, 0, 0.66, 1, 799, 4, 0, 0, 0, 0, 0, 1 ] ]
[ "from utils.start_cpp import start_cpp", "numpy_util_code = start_cpp() + \"\"\"\n#ifndef NUMPY_UTIL_CODE\n#define NUMPY_UTIL_CODE\n\nfloat & Float1D(PyArrayObject * arr, int index = 0)\n{\n return *(float*)(arr->data + index*arr->strides[0]);\n}" ]
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.2857, 0.0179, 0, 0.66, 0, 192, 0, 1, 0, 0, 192, 0, 0 ], [ 1, 0, 0.3036, 0.0179, 0, 0.66, 0.0385, 905, 0, 1, 0, 0, 905, 0, 0 ], [ 1, 0, 0.3214, 0.0179, 0, ...
[ "import cvarray", "import mp_map", "import prog_bar", "import numpy_help_cpp", "import python_obj_cpp", "import matrix_cpp", "import gamma_cpp", "import setProcName", "import start_cpp", "import make", "import doc_gen", "doc = doc_gen.DocGen('utils', 'Utilities/Miscellaneous', 'Library of misc...
# Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0818, 0.0063, 0, 0.66, 0, 88, 0, 1, 0, 0, 88, 0, 0 ], [ 1, 0, 0.0881, 0.0063, 0, 0.66, 0.0909, 715, 0, 1, 0, 0, 715, 0, 0 ], [ 1, 0, 0.0943, 0.0063, 0, 0....
[ "import unittest", "import random", "import math", "from scipy.special import gammaln, psi, polygamma", "from scipy import weave", "from utils.start_cpp import start_cpp", "gamma_code = start_cpp() + \"\"\"\n#ifndef GAMMA_CODE\n#define GAMMA_CODE\n\n#include <cmath>\n\n// Returns the natural logarithm o...
# -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.5, 0.0333, 0, 0.66, 0, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 1, 0, 0.5333, 0.0333, 0, 0.66, 0.5, 154, 0, 1, 0, 0, 154, 0, 0 ], [ 2, 0, 0.8333, 0.3667, 0, 0.66, ...
[ "import inspect", "import hashlib", "def start_cpp(hash_str = None):\n \"\"\"This method does two things - firstly it adds the correct line numbers to scipy.weave code (Good for debugging) and secondly it can optionaly inserts a hash code of some other code into the code. This latter feature is useful for work...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.2031, 0.0156, 0, 0.66, 0, 509, 0, 1, 0, 0, 509, 0, 0 ], [ 1, 0, 0.2188, 0.0156, 0, 0.66, 0.125, 79, 0, 1, 0, 0, 79, 0, 0 ], [ 1, 0, 0.2344, 0.0156, 0, 0.6...
[ "import sys", "import os.path", "import tempfile", "import shutil", "from distutils.core import setup, Extension", "import distutils.ccompiler", "import distutils.dep_util", "try:\n __default_compiler = distutils.ccompiler.new_compiler()\nexcept:\n __default_compiler = None", " __default_compiler...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0634, 0.0049, 0, 0.66, 0, 291, 0, 1, 0, 0, 291, 0, 0 ], [ 1, 0, 0.0683, 0.0049, 0, 0.66, 0.5, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 3, 0, 0.5439, 0.9171, 0, 0.6...
[ "import pydoc", "import inspect", "class DocGen:\n \"\"\"A helper class that is used to generate documentation for the system. Outputs multiple formats simultaneously, specifically html for local reading with a webbrowser and the markup used by the wiki system on Google code.\"\"\"\n def __init__(self, name, ...
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.3636, 0.0227, 0, 0.66, 0, 182, 0, 1, 0, 0, 182, 0, 0 ], [ 2, 0, 0.5682, 0.25, 0, 0.66, 0.5, 903, 0, 1, 0, 0, 0, 0, 9 ], [ 8, 1, 0.4773, 0.0227, 1, 0.79, ...
[ "from ctypes import *", "def setProcName(name):\n \"\"\"Sets the process name, linux only - useful for those programs where you might want to do a killall, but don't want to slaughter all the other python processes. Note that there are multiple mechanisms, and that the given new name can be shortened by differin...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1456, 0.0097, 0, 0.66, 0, 901, 0, 1, 0, 0, 901, 0, 0 ], [ 1, 0, 0.1553, 0.0097, 0, 0.66, 0.1111, 99, 0, 1, 0, 0, 99, 0, 0 ], [ 1, 0, 0.1748, 0.0097, 0, 0....
[ "import multiprocessing as mp", "import multiprocessing.synchronize # To make sure we have all the functionality.", "import types", "import marshal", "import unittest", "def repeat(x):\n \"\"\"A generator that repeats the input forever - can be used with the mp_map function to give data to a function tha...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1923, 0.0128, 0, 0.66, 0, 972, 0, 1, 0, 0, 972, 0, 0 ], [ 14, 0, 0.6282, 0.7564, 0, 0.66, 1, 799, 4, 0, 0, 0, 0, 0, 1 ] ]
[ "from utils.start_cpp import start_cpp", "numpy_util_code = start_cpp() + \"\"\"\n#ifndef NUMPY_UTIL_CODE\n#define NUMPY_UTIL_CODE\n\nfloat & Float1D(PyArrayObject * arr, int index = 0)\n{\n return *(float*)(arr->data + index*arr->strides[0]);\n}" ]
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.2857, 0.0179, 0, 0.66, 0, 192, 0, 1, 0, 0, 192, 0, 0 ], [ 1, 0, 0.3036, 0.0179, 0, 0.66, 0.0385, 905, 0, 1, 0, 0, 905, 0, 0 ], [ 1, 0, 0.3214, 0.0179, 0, ...
[ "import cvarray", "import mp_map", "import prog_bar", "import numpy_help_cpp", "import python_obj_cpp", "import matrix_cpp", "import gamma_cpp", "import setProcName", "import start_cpp", "import make", "import doc_gen", "doc = doc_gen.DocGen('utils', 'Utilities/Miscellaneous', 'Library of misc...
# Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0818, 0.0063, 0, 0.66, 0, 88, 0, 1, 0, 0, 88, 0, 0 ], [ 1, 0, 0.0881, 0.0063, 0, 0.66, 0.0909, 715, 0, 1, 0, 0, 715, 0, 0 ], [ 1, 0, 0.0943, 0.0063, 0, 0....
[ "import unittest", "import random", "import math", "from scipy.special import gammaln, psi, polygamma", "from scipy import weave", "from utils.start_cpp import start_cpp", "gamma_code = start_cpp() + \"\"\"\n#ifndef GAMMA_CODE\n#define GAMMA_CODE\n\n#include <cmath>\n\n// Returns the natural logarithm o...
# -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.5, 0.0333, 0, 0.66, 0, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 1, 0, 0.5333, 0.0333, 0, 0.66, 0.5, 154, 0, 1, 0, 0, 154, 0, 0 ], [ 2, 0, 0.8333, 0.3667, 0, 0.66, ...
[ "import inspect", "import hashlib", "def start_cpp(hash_str = None):\n \"\"\"This method does two things - firstly it adds the correct line numbers to scipy.weave code (Good for debugging) and secondly it can optionaly inserts a hash code of some other code into the code. This latter feature is useful for work...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.2031, 0.0156, 0, 0.66, 0, 509, 0, 1, 0, 0, 509, 0, 0 ], [ 1, 0, 0.2188, 0.0156, 0, 0.66, 0.125, 79, 0, 1, 0, 0, 79, 0, 0 ], [ 1, 0, 0.2344, 0.0156, 0, 0.6...
[ "import sys", "import os.path", "import tempfile", "import shutil", "from distutils.core import setup, Extension", "import distutils.ccompiler", "import distutils.dep_util", "try:\n __default_compiler = distutils.ccompiler.new_compiler()\nexcept:\n __default_compiler = None", " __default_compiler...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0634, 0.0049, 0, 0.66, 0, 291, 0, 1, 0, 0, 291, 0, 0 ], [ 1, 0, 0.0683, 0.0049, 0, 0.66, 0.5, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 3, 0, 0.5439, 0.9171, 0, 0.6...
[ "import pydoc", "import inspect", "class DocGen:\n \"\"\"A helper class that is used to generate documentation for the system. Outputs multiple formats simultaneously, specifically html for local reading with a webbrowser and the markup used by the wiki system on Google code.\"\"\"\n def __init__(self, name, ...
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.3636, 0.0227, 0, 0.66, 0, 182, 0, 1, 0, 0, 182, 0, 0 ], [ 2, 0, 0.5682, 0.25, 0, 0.66, 0.5, 903, 0, 1, 0, 0, 0, 0, 9 ], [ 8, 1, 0.4773, 0.0227, 1, 0.31, ...
[ "from ctypes import *", "def setProcName(name):\n \"\"\"Sets the process name, linux only - useful for those programs where you might want to do a killall, but don't want to slaughter all the other python processes. Note that there are multiple mechanisms, and that the given new name can be shortened by differin...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1456, 0.0097, 0, 0.66, 0, 901, 0, 1, 0, 0, 901, 0, 0 ], [ 1, 0, 0.1553, 0.0097, 0, 0.66, 0.1111, 99, 0, 1, 0, 0, 99, 0, 0 ], [ 1, 0, 0.1748, 0.0097, 0, 0....
[ "import multiprocessing as mp", "import multiprocessing.synchronize # To make sure we have all the functionality.", "import types", "import marshal", "import unittest", "def repeat(x):\n \"\"\"A generator that repeats the input forever - can be used with the mp_map function to give data to a function tha...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1923, 0.0128, 0, 0.66, 0, 972, 0, 1, 0, 0, 972, 0, 0 ], [ 14, 0, 0.6282, 0.7564, 0, 0.66, 1, 799, 4, 0, 0, 0, 0, 0, 1 ] ]
[ "from utils.start_cpp import start_cpp", "numpy_util_code = start_cpp() + \"\"\"\n#ifndef NUMPY_UTIL_CODE\n#define NUMPY_UTIL_CODE\n\nfloat & Float1D(PyArrayObject * arr, int index = 0)\n{\n return *(float*)(arr->data + index*arr->strides[0]);\n}" ]
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.2857, 0.0179, 0, 0.66, 0, 192, 0, 1, 0, 0, 192, 0, 0 ], [ 1, 0, 0.3036, 0.0179, 0, 0.66, 0.0385, 905, 0, 1, 0, 0, 905, 0, 0 ], [ 1, 0, 0.3214, 0.0179, 0, ...
[ "import cvarray", "import mp_map", "import prog_bar", "import numpy_help_cpp", "import python_obj_cpp", "import matrix_cpp", "import gamma_cpp", "import setProcName", "import start_cpp", "import make", "import doc_gen", "doc = doc_gen.DocGen('utils', 'Utilities/Miscellaneous', 'Library of misc...
# Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0818, 0.0063, 0, 0.66, 0, 88, 0, 1, 0, 0, 88, 0, 0 ], [ 1, 0, 0.0881, 0.0063, 0, 0.66, 0.0909, 715, 0, 1, 0, 0, 715, 0, 0 ], [ 1, 0, 0.0943, 0.0063, 0, 0....
[ "import unittest", "import random", "import math", "from scipy.special import gammaln, psi, polygamma", "from scipy import weave", "from utils.start_cpp import start_cpp", "gamma_code = start_cpp() + \"\"\"\n#ifndef GAMMA_CODE\n#define GAMMA_CODE\n\n#include <cmath>\n\n// Returns the natural logarithm o...
# -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.5, 0.0333, 0, 0.66, 0, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 1, 0, 0.5333, 0.0333, 0, 0.66, 0.5, 154, 0, 1, 0, 0, 154, 0, 0 ], [ 2, 0, 0.8333, 0.3667, 0, 0.66, ...
[ "import inspect", "import hashlib", "def start_cpp(hash_str = None):\n \"\"\"This method does two things - firstly it adds the correct line numbers to scipy.weave code (Good for debugging) and secondly it can optionaly inserts a hash code of some other code into the code. This latter feature is useful for work...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.2031, 0.0156, 0, 0.66, 0, 509, 0, 1, 0, 0, 509, 0, 0 ], [ 1, 0, 0.2188, 0.0156, 0, 0.66, 0.125, 79, 0, 1, 0, 0, 79, 0, 0 ], [ 1, 0, 0.2344, 0.0156, 0, 0.6...
[ "import sys", "import os.path", "import tempfile", "import shutil", "from distutils.core import setup, Extension", "import distutils.ccompiler", "import distutils.dep_util", "try:\n __default_compiler = distutils.ccompiler.new_compiler()\nexcept:\n __default_compiler = None", " __default_compiler...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0634, 0.0049, 0, 0.66, 0, 291, 0, 1, 0, 0, 291, 0, 0 ], [ 1, 0, 0.0683, 0.0049, 0, 0.66, 0.5, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 3, 0, 0.5439, 0.9171, 0, 0.6...
[ "import pydoc", "import inspect", "class DocGen:\n \"\"\"A helper class that is used to generate documentation for the system. Outputs multiple formats simultaneously, specifically html for local reading with a webbrowser and the markup used by the wiki system on Google code.\"\"\"\n def __init__(self, name, ...
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.3636, 0.0227, 0, 0.66, 0, 182, 0, 1, 0, 0, 182, 0, 0 ], [ 2, 0, 0.5682, 0.25, 0, 0.66, 0.5, 903, 0, 1, 0, 0, 0, 0, 9 ], [ 8, 1, 0.4773, 0.0227, 1, 0.55, ...
[ "from ctypes import *", "def setProcName(name):\n \"\"\"Sets the process name, linux only - useful for those programs where you might want to do a killall, but don't want to slaughter all the other python processes. Note that there are multiple mechanisms, and that the given new name can be shortened by differin...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1456, 0.0097, 0, 0.66, 0, 901, 0, 1, 0, 0, 901, 0, 0 ], [ 1, 0, 0.1553, 0.0097, 0, 0.66, 0.1111, 99, 0, 1, 0, 0, 99, 0, 0 ], [ 1, 0, 0.1748, 0.0097, 0, 0....
[ "import multiprocessing as mp", "import multiprocessing.synchronize # To make sure we have all the functionality.", "import types", "import marshal", "import unittest", "def repeat(x):\n \"\"\"A generator that repeats the input forever - can be used with the mp_map function to give data to a function tha...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1923, 0.0128, 0, 0.66, 0, 972, 0, 1, 0, 0, 972, 0, 0 ], [ 14, 0, 0.6282, 0.7564, 0, 0.66, 1, 799, 4, 0, 0, 0, 0, 0, 1 ] ]
[ "from utils.start_cpp import start_cpp", "numpy_util_code = start_cpp() + \"\"\"\n#ifndef NUMPY_UTIL_CODE\n#define NUMPY_UTIL_CODE\n\nfloat & Float1D(PyArrayObject * arr, int index = 0)\n{\n return *(float*)(arr->data + index*arr->strides[0]);\n}" ]
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.2857, 0.0179, 0, 0.66, 0, 192, 0, 1, 0, 0, 192, 0, 0 ], [ 1, 0, 0.3036, 0.0179, 0, 0.66, 0.0385, 905, 0, 1, 0, 0, 905, 0, 0 ], [ 1, 0, 0.3214, 0.0179, 0, ...
[ "import cvarray", "import mp_map", "import prog_bar", "import numpy_help_cpp", "import python_obj_cpp", "import matrix_cpp", "import gamma_cpp", "import setProcName", "import start_cpp", "import make", "import doc_gen", "doc = doc_gen.DocGen('utils', 'Utilities/Miscellaneous', 'Library of misc...
# Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0818, 0.0063, 0, 0.66, 0, 88, 0, 1, 0, 0, 88, 0, 0 ], [ 1, 0, 0.0881, 0.0063, 0, 0.66, 0.0909, 715, 0, 1, 0, 0, 715, 0, 0 ], [ 1, 0, 0.0943, 0.0063, 0, 0....
[ "import unittest", "import random", "import math", "from scipy.special import gammaln, psi, polygamma", "from scipy import weave", "from utils.start_cpp import start_cpp", "gamma_code = start_cpp() + \"\"\"\n#ifndef GAMMA_CODE\n#define GAMMA_CODE\n\n#include <cmath>\n\n// Returns the natural logarithm o...
# -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.5, 0.0333, 0, 0.66, 0, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 1, 0, 0.5333, 0.0333, 0, 0.66, 0.5, 154, 0, 1, 0, 0, 154, 0, 0 ], [ 2, 0, 0.8333, 0.3667, 0, 0.66, ...
[ "import inspect", "import hashlib", "def start_cpp(hash_str = None):\n \"\"\"This method does two things - firstly it adds the correct line numbers to scipy.weave code (Good for debugging) and secondly it can optionaly inserts a hash code of some other code into the code. This latter feature is useful for work...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.2031, 0.0156, 0, 0.66, 0, 509, 0, 1, 0, 0, 509, 0, 0 ], [ 1, 0, 0.2188, 0.0156, 0, 0.66, 0.125, 79, 0, 1, 0, 0, 79, 0, 0 ], [ 1, 0, 0.2344, 0.0156, 0, 0.6...
[ "import sys", "import os.path", "import tempfile", "import shutil", "from distutils.core import setup, Extension", "import distutils.ccompiler", "import distutils.dep_util", "try:\n __default_compiler = distutils.ccompiler.new_compiler()\nexcept:\n __default_compiler = None", " __default_compiler...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0634, 0.0049, 0, 0.66, 0, 291, 0, 1, 0, 0, 291, 0, 0 ], [ 1, 0, 0.0683, 0.0049, 0, 0.66, 0.5, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 3, 0, 0.5439, 0.9171, 0, 0.6...
[ "import pydoc", "import inspect", "class DocGen:\n \"\"\"A helper class that is used to generate documentation for the system. Outputs multiple formats simultaneously, specifically html for local reading with a webbrowser and the markup used by the wiki system on Google code.\"\"\"\n def __init__(self, name, ...
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.3636, 0.0227, 0, 0.66, 0, 182, 0, 1, 0, 0, 182, 0, 0 ], [ 2, 0, 0.5682, 0.25, 0, 0.66, 0.5, 903, 0, 1, 0, 0, 0, 0, 9 ], [ 8, 1, 0.4773, 0.0227, 1, 0.17, ...
[ "from ctypes import *", "def setProcName(name):\n \"\"\"Sets the process name, linux only - useful for those programs where you might want to do a killall, but don't want to slaughter all the other python processes. Note that there are multiple mechanisms, and that the given new name can be shortened by differin...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1456, 0.0097, 0, 0.66, 0, 901, 0, 1, 0, 0, 901, 0, 0 ], [ 1, 0, 0.1553, 0.0097, 0, 0.66, 0.1111, 99, 0, 1, 0, 0, 99, 0, 0 ], [ 1, 0, 0.1748, 0.0097, 0, 0....
[ "import multiprocessing as mp", "import multiprocessing.synchronize # To make sure we have all the functionality.", "import types", "import marshal", "import unittest", "def repeat(x):\n \"\"\"A generator that repeats the input forever - can be used with the mp_map function to give data to a function tha...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1923, 0.0128, 0, 0.66, 0, 972, 0, 1, 0, 0, 972, 0, 0 ], [ 14, 0, 0.6282, 0.7564, 0, 0.66, 1, 799, 4, 0, 0, 0, 0, 0, 1 ] ]
[ "from utils.start_cpp import start_cpp", "numpy_util_code = start_cpp() + \"\"\"\n#ifndef NUMPY_UTIL_CODE\n#define NUMPY_UTIL_CODE\n\nfloat & Float1D(PyArrayObject * arr, int index = 0)\n{\n return *(float*)(arr->data + index*arr->strides[0]);\n}" ]
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.2857, 0.0179, 0, 0.66, 0, 192, 0, 1, 0, 0, 192, 0, 0 ], [ 1, 0, 0.3036, 0.0179, 0, 0.66, 0.0385, 905, 0, 1, 0, 0, 905, 0, 0 ], [ 1, 0, 0.3214, 0.0179, 0, ...
[ "import cvarray", "import mp_map", "import prog_bar", "import numpy_help_cpp", "import python_obj_cpp", "import matrix_cpp", "import gamma_cpp", "import setProcName", "import start_cpp", "import make", "import doc_gen", "doc = doc_gen.DocGen('utils', 'Utilities/Miscellaneous', 'Library of misc...
# Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0818, 0.0063, 0, 0.66, 0, 88, 0, 1, 0, 0, 88, 0, 0 ], [ 1, 0, 0.0881, 0.0063, 0, 0.66, 0.0909, 715, 0, 1, 0, 0, 715, 0, 0 ], [ 1, 0, 0.0943, 0.0063, 0, 0....
[ "import unittest", "import random", "import math", "from scipy.special import gammaln, psi, polygamma", "from scipy import weave", "from utils.start_cpp import start_cpp", "gamma_code = start_cpp() + \"\"\"\n#ifndef GAMMA_CODE\n#define GAMMA_CODE\n\n#include <cmath>\n\n// Returns the natural logarithm o...
# -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.5, 0.0333, 0, 0.66, 0, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 1, 0, 0.5333, 0.0333, 0, 0.66, 0.5, 154, 0, 1, 0, 0, 154, 0, 0 ], [ 2, 0, 0.8333, 0.3667, 0, 0.66, ...
[ "import inspect", "import hashlib", "def start_cpp(hash_str = None):\n \"\"\"This method does two things - firstly it adds the correct line numbers to scipy.weave code (Good for debugging) and secondly it can optionaly inserts a hash code of some other code into the code. This latter feature is useful for work...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.2031, 0.0156, 0, 0.66, 0, 509, 0, 1, 0, 0, 509, 0, 0 ], [ 1, 0, 0.2188, 0.0156, 0, 0.66, 0.125, 79, 0, 1, 0, 0, 79, 0, 0 ], [ 1, 0, 0.2344, 0.0156, 0, 0.6...
[ "import sys", "import os.path", "import tempfile", "import shutil", "from distutils.core import setup, Extension", "import distutils.ccompiler", "import distutils.dep_util", "try:\n __default_compiler = distutils.ccompiler.new_compiler()\nexcept:\n __default_compiler = None", " __default_compiler...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0634, 0.0049, 0, 0.66, 0, 291, 0, 1, 0, 0, 291, 0, 0 ], [ 1, 0, 0.0683, 0.0049, 0, 0.66, 0.5, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 3, 0, 0.5439, 0.9171, 0, 0.6...
[ "import pydoc", "import inspect", "class DocGen:\n \"\"\"A helper class that is used to generate documentation for the system. Outputs multiple formats simultaneously, specifically html for local reading with a webbrowser and the markup used by the wiki system on Google code.\"\"\"\n def __init__(self, name, ...
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.3636, 0.0227, 0, 0.66, 0, 182, 0, 1, 0, 0, 182, 0, 0 ], [ 2, 0, 0.5682, 0.25, 0, 0.66, 0.5, 903, 0, 1, 0, 0, 0, 0, 9 ], [ 8, 1, 0.4773, 0.0227, 1, 0.74, ...
[ "from ctypes import *", "def setProcName(name):\n \"\"\"Sets the process name, linux only - useful for those programs where you might want to do a killall, but don't want to slaughter all the other python processes. Note that there are multiple mechanisms, and that the given new name can be shortened by differin...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1456, 0.0097, 0, 0.66, 0, 901, 0, 1, 0, 0, 901, 0, 0 ], [ 1, 0, 0.1553, 0.0097, 0, 0.66, 0.1111, 99, 0, 1, 0, 0, 99, 0, 0 ], [ 1, 0, 0.1748, 0.0097, 0, 0....
[ "import multiprocessing as mp", "import multiprocessing.synchronize # To make sure we have all the functionality.", "import types", "import marshal", "import unittest", "def repeat(x):\n \"\"\"A generator that repeats the input forever - can be used with the mp_map function to give data to a function tha...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1923, 0.0128, 0, 0.66, 0, 972, 0, 1, 0, 0, 972, 0, 0 ], [ 14, 0, 0.6282, 0.7564, 0, 0.66, 1, 799, 4, 0, 0, 0, 0, 0, 1 ] ]
[ "from utils.start_cpp import start_cpp", "numpy_util_code = start_cpp() + \"\"\"\n#ifndef NUMPY_UTIL_CODE\n#define NUMPY_UTIL_CODE\n\nfloat & Float1D(PyArrayObject * arr, int index = 0)\n{\n return *(float*)(arr->data + index*arr->strides[0]);\n}" ]
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.2857, 0.0179, 0, 0.66, 0, 192, 0, 1, 0, 0, 192, 0, 0 ], [ 1, 0, 0.3036, 0.0179, 0, 0.66, 0.0385, 905, 0, 1, 0, 0, 905, 0, 0 ], [ 1, 0, 0.3214, 0.0179, 0, ...
[ "import cvarray", "import mp_map", "import prog_bar", "import numpy_help_cpp", "import python_obj_cpp", "import matrix_cpp", "import gamma_cpp", "import setProcName", "import start_cpp", "import make", "import doc_gen", "doc = doc_gen.DocGen('utils', 'Utilities/Miscellaneous', 'Library of misc...
# Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0818, 0.0063, 0, 0.66, 0, 88, 0, 1, 0, 0, 88, 0, 0 ], [ 1, 0, 0.0881, 0.0063, 0, 0.66, 0.0909, 715, 0, 1, 0, 0, 715, 0, 0 ], [ 1, 0, 0.0943, 0.0063, 0, 0....
[ "import unittest", "import random", "import math", "from scipy.special import gammaln, psi, polygamma", "from scipy import weave", "from utils.start_cpp import start_cpp", "gamma_code = start_cpp() + \"\"\"\n#ifndef GAMMA_CODE\n#define GAMMA_CODE\n\n#include <cmath>\n\n// Returns the natural logarithm o...
# -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.5, 0.0333, 0, 0.66, 0, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 1, 0, 0.5333, 0.0333, 0, 0.66, 0.5, 154, 0, 1, 0, 0, 154, 0, 0 ], [ 2, 0, 0.8333, 0.3667, 0, 0.66, ...
[ "import inspect", "import hashlib", "def start_cpp(hash_str = None):\n \"\"\"This method does two things - firstly it adds the correct line numbers to scipy.weave code (Good for debugging) and secondly it can optionaly inserts a hash code of some other code into the code. This latter feature is useful for work...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.2031, 0.0156, 0, 0.66, 0, 509, 0, 1, 0, 0, 509, 0, 0 ], [ 1, 0, 0.2188, 0.0156, 0, 0.66, 0.125, 79, 0, 1, 0, 0, 79, 0, 0 ], [ 1, 0, 0.2344, 0.0156, 0, 0.6...
[ "import sys", "import os.path", "import tempfile", "import shutil", "from distutils.core import setup, Extension", "import distutils.ccompiler", "import distutils.dep_util", "try:\n __default_compiler = distutils.ccompiler.new_compiler()\nexcept:\n __default_compiler = None", " __default_compiler...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0634, 0.0049, 0, 0.66, 0, 291, 0, 1, 0, 0, 291, 0, 0 ], [ 1, 0, 0.0683, 0.0049, 0, 0.66, 0.5, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 3, 0, 0.5439, 0.9171, 0, 0.6...
[ "import pydoc", "import inspect", "class DocGen:\n \"\"\"A helper class that is used to generate documentation for the system. Outputs multiple formats simultaneously, specifically html for local reading with a webbrowser and the markup used by the wiki system on Google code.\"\"\"\n def __init__(self, name, ...
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.3636, 0.0227, 0, 0.66, 0, 182, 0, 1, 0, 0, 182, 0, 0 ], [ 2, 0, 0.5682, 0.25, 0, 0.66, 0.5, 903, 0, 1, 0, 0, 0, 0, 9 ], [ 8, 1, 0.4773, 0.0227, 1, 0.88, ...
[ "from ctypes import *", "def setProcName(name):\n \"\"\"Sets the process name, linux only - useful for those programs where you might want to do a killall, but don't want to slaughter all the other python processes. Note that there are multiple mechanisms, and that the given new name can be shortened by differin...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1456, 0.0097, 0, 0.66, 0, 901, 0, 1, 0, 0, 901, 0, 0 ], [ 1, 0, 0.1553, 0.0097, 0, 0.66, 0.1111, 99, 0, 1, 0, 0, 99, 0, 0 ], [ 1, 0, 0.1748, 0.0097, 0, 0....
[ "import multiprocessing as mp", "import multiprocessing.synchronize # To make sure we have all the functionality.", "import types", "import marshal", "import unittest", "def repeat(x):\n \"\"\"A generator that repeats the input forever - can be used with the mp_map function to give data to a function tha...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1923, 0.0128, 0, 0.66, 0, 972, 0, 1, 0, 0, 972, 0, 0 ], [ 14, 0, 0.6282, 0.7564, 0, 0.66, 1, 799, 4, 0, 0, 0, 0, 0, 1 ] ]
[ "from utils.start_cpp import start_cpp", "numpy_util_code = start_cpp() + \"\"\"\n#ifndef NUMPY_UTIL_CODE\n#define NUMPY_UTIL_CODE\n\nfloat & Float1D(PyArrayObject * arr, int index = 0)\n{\n return *(float*)(arr->data + index*arr->strides[0]);\n}" ]
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.2857, 0.0179, 0, 0.66, 0, 192, 0, 1, 0, 0, 192, 0, 0 ], [ 1, 0, 0.3036, 0.0179, 0, 0.66, 0.0385, 905, 0, 1, 0, 0, 905, 0, 0 ], [ 1, 0, 0.3214, 0.0179, 0, ...
[ "import cvarray", "import mp_map", "import prog_bar", "import numpy_help_cpp", "import python_obj_cpp", "import matrix_cpp", "import gamma_cpp", "import setProcName", "import start_cpp", "import make", "import doc_gen", "doc = doc_gen.DocGen('utils', 'Utilities/Miscellaneous', 'Library of misc...
# Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0818, 0.0063, 0, 0.66, 0, 88, 0, 1, 0, 0, 88, 0, 0 ], [ 1, 0, 0.0881, 0.0063, 0, 0.66, 0.0909, 715, 0, 1, 0, 0, 715, 0, 0 ], [ 1, 0, 0.0943, 0.0063, 0, 0....
[ "import unittest", "import random", "import math", "from scipy.special import gammaln, psi, polygamma", "from scipy import weave", "from utils.start_cpp import start_cpp", "gamma_code = start_cpp() + \"\"\"\n#ifndef GAMMA_CODE\n#define GAMMA_CODE\n\n#include <cmath>\n\n// Returns the natural logarithm o...
# -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.5, 0.0333, 0, 0.66, 0, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 1, 0, 0.5333, 0.0333, 0, 0.66, 0.5, 154, 0, 1, 0, 0, 154, 0, 0 ], [ 2, 0, 0.8333, 0.3667, 0, 0.66, ...
[ "import inspect", "import hashlib", "def start_cpp(hash_str = None):\n \"\"\"This method does two things - firstly it adds the correct line numbers to scipy.weave code (Good for debugging) and secondly it can optionaly inserts a hash code of some other code into the code. This latter feature is useful for work...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.2031, 0.0156, 0, 0.66, 0, 509, 0, 1, 0, 0, 509, 0, 0 ], [ 1, 0, 0.2188, 0.0156, 0, 0.66, 0.125, 79, 0, 1, 0, 0, 79, 0, 0 ], [ 1, 0, 0.2344, 0.0156, 0, 0.6...
[ "import sys", "import os.path", "import tempfile", "import shutil", "from distutils.core import setup, Extension", "import distutils.ccompiler", "import distutils.dep_util", "try:\n __default_compiler = distutils.ccompiler.new_compiler()\nexcept:\n __default_compiler = None", " __default_compiler...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0634, 0.0049, 0, 0.66, 0, 291, 0, 1, 0, 0, 291, 0, 0 ], [ 1, 0, 0.0683, 0.0049, 0, 0.66, 0.5, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 3, 0, 0.5439, 0.9171, 0, 0.6...
[ "import pydoc", "import inspect", "class DocGen:\n \"\"\"A helper class that is used to generate documentation for the system. Outputs multiple formats simultaneously, specifically html for local reading with a webbrowser and the markup used by the wiki system on Google code.\"\"\"\n def __init__(self, name, ...
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.3636, 0.0227, 0, 0.66, 0, 182, 0, 1, 0, 0, 182, 0, 0 ], [ 2, 0, 0.5682, 0.25, 0, 0.66, 0.5, 903, 0, 1, 0, 0, 0, 0, 9 ], [ 8, 1, 0.4773, 0.0227, 1, 0.82, ...
[ "from ctypes import *", "def setProcName(name):\n \"\"\"Sets the process name, linux only - useful for those programs where you might want to do a killall, but don't want to slaughter all the other python processes. Note that there are multiple mechanisms, and that the given new name can be shortened by differin...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1456, 0.0097, 0, 0.66, 0, 901, 0, 1, 0, 0, 901, 0, 0 ], [ 1, 0, 0.1553, 0.0097, 0, 0.66, 0.1111, 99, 0, 1, 0, 0, 99, 0, 0 ], [ 1, 0, 0.1748, 0.0097, 0, 0....
[ "import multiprocessing as mp", "import multiprocessing.synchronize # To make sure we have all the functionality.", "import types", "import marshal", "import unittest", "def repeat(x):\n \"\"\"A generator that repeats the input forever - can be used with the mp_map function to give data to a function tha...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.1923, 0.0128, 0, 0.66, 0, 972, 0, 1, 0, 0, 972, 0, 0 ], [ 14, 0, 0.6282, 0.7564, 0, 0.66, 1, 799, 4, 0, 0, 0, 0, 0, 1 ] ]
[ "from utils.start_cpp import start_cpp", "numpy_util_code = start_cpp() + \"\"\"\n#ifndef NUMPY_UTIL_CODE\n#define NUMPY_UTIL_CODE\n\nfloat & Float1D(PyArrayObject * arr, int index = 0)\n{\n return *(float*)(arr->data + index*arr->strides[0]);\n}" ]
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.2857, 0.0179, 0, 0.66, 0, 192, 0, 1, 0, 0, 192, 0, 0 ], [ 1, 0, 0.3036, 0.0179, 0, 0.66, 0.0385, 905, 0, 1, 0, 0, 905, 0, 0 ], [ 1, 0, 0.3214, 0.0179, 0, ...
[ "import cvarray", "import mp_map", "import prog_bar", "import numpy_help_cpp", "import python_obj_cpp", "import matrix_cpp", "import gamma_cpp", "import setProcName", "import start_cpp", "import make", "import doc_gen", "doc = doc_gen.DocGen('utils', 'Utilities/Miscellaneous', 'Library of misc...
# Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0818, 0.0063, 0, 0.66, 0, 88, 0, 1, 0, 0, 88, 0, 0 ], [ 1, 0, 0.0881, 0.0063, 0, 0.66, 0.0909, 715, 0, 1, 0, 0, 715, 0, 0 ], [ 1, 0, 0.0943, 0.0063, 0, 0....
[ "import unittest", "import random", "import math", "from scipy.special import gammaln, psi, polygamma", "from scipy import weave", "from utils.start_cpp import start_cpp", "gamma_code = start_cpp() + \"\"\"\n#ifndef GAMMA_CODE\n#define GAMMA_CODE\n\n#include <cmath>\n\n// Returns the natural logarithm o...
# -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
[ [ 1, 0, 0.5, 0.0333, 0, 0.66, 0, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 1, 0, 0.5333, 0.0333, 0, 0.66, 0.5, 154, 0, 1, 0, 0, 154, 0, 0 ], [ 2, 0, 0.8333, 0.3667, 0, 0.66, ...
[ "import inspect", "import hashlib", "def start_cpp(hash_str = None):\n \"\"\"This method does two things - firstly it adds the correct line numbers to scipy.weave code (Good for debugging) and secondly it can optionaly inserts a hash code of some other code into the code. This latter feature is useful for work...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.2031, 0.0156, 0, 0.66, 0, 509, 0, 1, 0, 0, 509, 0, 0 ], [ 1, 0, 0.2188, 0.0156, 0, 0.66, 0.125, 79, 0, 1, 0, 0, 79, 0, 0 ], [ 1, 0, 0.2344, 0.0156, 0, 0.6...
[ "import sys", "import os.path", "import tempfile", "import shutil", "from distutils.core import setup, Extension", "import distutils.ccompiler", "import distutils.dep_util", "try:\n __default_compiler = distutils.ccompiler.new_compiler()\nexcept:\n __default_compiler = None", " __default_compiler...
# Copyright (c) 2012, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
[ [ 1, 0, 0.0634, 0.0049, 0, 0.66, 0, 291, 0, 1, 0, 0, 291, 0, 0 ], [ 1, 0, 0.0683, 0.0049, 0, 0.66, 0.5, 878, 0, 1, 0, 0, 878, 0, 0 ], [ 3, 0, 0.5439, 0.9171, 0, 0.6...
[ "import pydoc", "import inspect", "class DocGen:\n \"\"\"A helper class that is used to generate documentation for the system. Outputs multiple formats simultaneously, specifically html for local reading with a webbrowser and the markup used by the wiki system on Google code.\"\"\"\n def __init__(self, name, ...
#! /usr/bin/env python # -*- coding: utf-8 -*- # Copyright (c) 2010, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyrig...
[ [ 1, 0, 0.3636, 0.0227, 0, 0.66, 0, 182, 0, 1, 0, 0, 182, 0, 0 ], [ 2, 0, 0.5682, 0.25, 0, 0.66, 0.5, 903, 0, 1, 0, 0, 0, 0, 9 ], [ 8, 1, 0.4773, 0.0227, 1, 0.22, ...
[ "from ctypes import *", "def setProcName(name):\n \"\"\"Sets the process name, linux only - useful for those programs where you might want to do a killall, but don't want to slaughter all the other python processes. Note that there are multiple mechanisms, and that the given new name can be shortened by differin...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
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[ "import multiprocessing as mp", "import multiprocessing.synchronize # To make sure we have all the functionality.", "import types", "import marshal", "import unittest", "def repeat(x):\n \"\"\"A generator that repeats the input forever - can be used with the mp_map function to give data to a function tha...
# -*- coding: utf-8 -*- # Copyright (c) 2011, Tom SF Haines # All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright notice, this list of...
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[ "from utils.start_cpp import start_cpp", "numpy_util_code = start_cpp() + \"\"\"\n#ifndef NUMPY_UTIL_CODE\n#define NUMPY_UTIL_CODE\n\nfloat & Float1D(PyArrayObject * arr, int index = 0)\n{\n return *(float*)(arr->data + index*arr->strides[0]);\n}" ]
#! /usr/bin/env python # Copyright 2012 Tom SF Haines # Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at # http://www.apache.org/licenses/LICENSE-2.0 # Unless required by applicable law or agree...
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[ "import df", "from utils import doc_gen", "doc = doc_gen.DocGen('df', 'Decision Forests', 'Extensive random forests implimentation')", "doc.addFile('readme.txt', 'Overview')", "doc.addClass(df.DF)", "doc.addClass(df.ExemplarSet)", "doc.addClass(df.MatrixES)", "doc.addClass(df.MatrixGrow)", "doc.addC...
# Copyright 2012 Tom SF Haines # Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at # http://www.apache.org/licenses/LICENSE-2.0 # Unless required by applicable law or agreed to in writing, softwar...
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[ "class Pruner:\n \"\"\"This abstracts the decision of when to stop growing a tree. It takes various statistics and stops growing when some condition is met.\"\"\"\n \n def clone(self):\n \"\"\"Returns a copy of this object.\"\"\"\n raise NotImplementedError\n \n def keep(self, depth, trueCount, falseCo...
# Copyright 2012 Tom SF Haines # Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at # http://www.apache.org/licenses/LICENSE-2.0 # Unless required by applicable law or agreed to in writing, softwar...
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[ "import numpy", "import numpy.random", "from generators import Generator", "from tests import *", "from utils.start_cpp import start_cpp", "class AxisRandomGen(Generator, AxisSplit):\n \"\"\"Provides a generator for axis-aligned split planes that split the data set at random - uses a normal distribution ...
# -*- coding: utf-8 -*- # Copyright 2010 Tom SF Haines # Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at # http://www.apache.org/licenses/LICENSE-2.0 # Unless required by applicable law or agre...
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[ "import numpy", "import operator", "class Dataset:\n \"\"\"Contains a dataset - lots of pairs of feature vectors and labels. For conveniance labels can be arbitrary python objects, or at least python objects that work for indexing a dictionary.\"\"\"\n def __init__(self):\n # labels are internally stored a...
# -*- coding: utf-8 -*- # Copyright 2010 Tom SF Haines # Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at # http://www.apache.org/licenses/LICENSE-2.0 # Unless required by applicable law or agre...
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[ "from params import Params", "from smo import SMO", "from loo import looPair, looPairRange, looPairBrute", "import math", "import time", "import multiprocessing as mp", "import numpy", "def mpLooPairRange(params, data, lNeg, lPos, looDist):\n \"\"\"multiprocess wrapper around looPair needed for multi...
# -*- coding: utf-8 -*- # Copyright 2010 Tom SF Haines # Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at # http://www.apache.org/licenses/LICENSE-2.0 # Unless required by applicable law or agre...
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[ "import numpy", "from params import *", "from scipy.weave import inline", "class Model:\n \"\"\"Defines a model - this will consist of a parameters object to define the kernel (C is ignored, but will be the same as the trainning parameter if needed for reference.), a list of support vectors in a dataMatrix a...