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Update smart_fallback.py
Browse files- smart_fallback.py +3 -0
smart_fallback.py
CHANGED
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@@ -105,6 +105,7 @@ def google_accession_search(accession_id):
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# Method 1: Smarter Google
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def smart_google_queries(accession_id, metadata: dict):
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queries = [
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f'"{accession_id}"',
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f'"{accession_id}" site:ncbi.nlm.nih.gov',
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@@ -122,6 +123,7 @@ def smart_google_queries(accession_id, metadata: dict):
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definition = metadata.get("definition")
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date = metadata.get("collection_date")
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combined = []
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# Construct queries
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# if isolate and isolate!="unknown" and isolate!="Unpublished":
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# queries.append(f'"{isolate}" mitochondrial DNA')
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@@ -322,6 +324,7 @@ def filter_links_by_metadata(search_results, saveLinkFolder, accession=None):
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return filtered
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def smart_google_search(accession_id, metadata):
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queries = smart_google_queries(accession_id, metadata)
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links = []
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for q in queries:
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# Method 1: Smarter Google
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def smart_google_queries(accession_id, metadata: dict):
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print("inside smart google queries")
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queries = [
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f'"{accession_id}"',
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f'"{accession_id}" site:ncbi.nlm.nih.gov',
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definition = metadata.get("definition")
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date = metadata.get("collection_date")
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combined = []
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print("yeah get info")
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# Construct queries
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# if isolate and isolate!="unknown" and isolate!="Unpublished":
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# queries.append(f'"{isolate}" mitochondrial DNA')
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return filtered
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def smart_google_search(accession_id, metadata):
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print("doing smart goole queries")
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queries = smart_google_queries(accession_id, metadata)
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links = []
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for q in queries:
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